BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027E07SP1|AL428739
(885 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig480 1738 0.0
>3x_Contig480
Length = 3184
Score = 1738 bits (874), Expect = 0.0
Identities = 880/885 (99%)
Strand = Plus / Minus
Query: 1 atcaatatgcaaaggattgtagtcaccggataaacggtacaatgcagcctggtcttcaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3052 atcaatatgcaaaggattgtagtcaccggataaacggtacaatgcagcctggtcttcaaa 2993
Query: 61 agtagaaatttcagcttcaaaatcagggtcacctaagtccttagtgacaaacgctttcgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2992 agtagaaatttcagcttcaaaatcagggtcacctaagtccttagtgacaaacgctttcgt 2933
Query: 121 tgcaaatggtgatctctccttcgccttgttgataaccttattatccggaacgacagcgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2932 tgcaaatggtgatctctccttcgccttgttgataaccttattatccggaacgacagcgtt 2873
Query: 181 acgaacgaagaatgttccctcattgtaaathacaggttcattggtcttcgcatcaacagt 240
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2872 acgaacgaagaatgttccctcattgtaaataacaggttcattggtcttcgcatcaacagt 2813
Query: 241 ttcatacccaccaacaataatggctgctttggagcttttacccagaacctgtaaaggttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2812 ttcatacccaccaacaataatggctgctttggagcttttacccagaacctgtaaaggttt 2753
Query: 301 accagtggttctcaactcaccactagtgggtaatgggaacttattgatcttgaaatattg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2752 accagtggttctcaactcaccactagtgggtaatgggaacttattgatcttgaaatattg 2693
Query: 361 ttcaccatgcaatagcatagcgtaattganattatccactaactcatcgaatttgatatc 420
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 2692 ttcaccatgcaatagcatagcgtaattgaaattatccactaactcatcgaatttgatatc 2633
Query: 421 aatggacccatcagccatgtatggtatagtagcaaatgtaggcaacacttggaattgtgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2632 aatggacccatcagccatgtatggtatagtagcaaatgtaggcaacacttggaattgtgg 2573
Query: 481 atggttttcgtaagtgtattgtaattcccttgttgtagcaccaagacccaagttgtacaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2572 atggttttcgtaagtgtattgtaattcccttgttgtagcaccaagacccaagttgtacaa 2513
Query: 541 aatgacatcacgagaggtatacttgthagtcttgggtttagctttatctgctgcatgctt 600
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 2512 aatgacatcacgagaggtatacttgtaagtcttgggtttagctttatctgctgcatgctt 2453
Query: 601 atgcactgattgahgtattgccatactagattcctgagtagaactagggttcatggtacc 660
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2452 atgcactgattgaagtattgccatactagattcctgagtagaactagggttcatggtacc 2393
Query: 661 cttactgamatctgttaattctttccagtgttcggctagatattctggcgttgcatcact 720
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2392 cttactgaaatctgttaattctttccagtgttcggctagatattctggcgttgcatcact 2333
Query: 721 gttaacgatgcctctactcctttgccatcttgttaatccacaccaaccaccgcctacttc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2332 gttaacgatgcctctactcctttgccatcttgttaatccacaccaaccaccgcctacttc 2273
Query: 781 gaacaataaacctttcacacggttcttaccgagttcttgtaattcatcggagcataaaag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2272 gaacaataaacctttcacacggttcttaccgagttcttgtaattcatcggagcataaaag 2213
Query: 841 taccacaaatggggacacgaaaccggggtcaaaatgattgttcaa 885
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2212 taccacaaatggggacacgaaaccggggtcaaaatgattgttcaa 2168
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5281
Number of Sequences: 1807
Number of extensions: 5281
Number of successful extensions: 33
Number of sequences better than 1.0e-20: 1
length of query: 885
length of database: 10,358,551
effective HSP length: 16
effective length of query: 869
effective length of database: 10,329,639
effective search space: 8976456291
effective search space used: 8976456291
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)